PILOT

API Reference

  • API

scRNA-seq Analysis

  • Trajectory analysis of Myocardial Infarction using PILOT

Pathomics data Analysis

  • Trajectory Analysis of Kidney IgAN Data with PILOT

Patients sub-group detection

  • Patients sub-group detection by PILOT
  • Evaluate the presence of sample level batch effects by PILOT (Trajectory)
  • Evaluate the presence of sample level batch effects by PILOT (Subgroups of patients)
PILOT
  • Index

Index

C | E | F | G | H | M | P | R | T | W

C

  • cell_importance() (in module pilotpy.tl)
  • compute_diff_expressions() (in module pilotpy.tl)

E

  • exploring_specific_genes() (in module pilotpy.pl)

F

  • fit_pricipla_graph() (in module pilotpy.pl)

G

  • gene_cluster_differentiation() (in module pilotpy.tl)
  • genes_importance() (in module pilotpy.tl)
  • genes_selection_heatmap() (in module pilotpy.pl)
  • go_enrichment() (in module pilotpy.pl)

H

  • heatmaps() (in module pilotpy.pl)

M

  • module
    • pilotpy
    • pilotpy.pl
    • pilotpy.tl

P

  • pilotpy
    • module
  • pilotpy.pl
    • module
  • pilotpy.tl
    • module
  • plot_gene_list_pattern() (in module pilotpy.pl)
  • plot_hallmark_genes_clusters() (in module pilotpy.pl)

R

  • results_gene_cluster_differentiation() (in module pilotpy.tl)

T

  • trajectory() (in module pilotpy.pl)

W

  • wasserstein_distance() (in module pilotpy.tl)

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